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Mouse T-Types: Joint 10x & SMART-seq Taxonomy

Explore the latest taxonomy of mouse cell types, generated with 1.2M cells and joint analysis of 10x & SMART-seq data.

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Human Transcriptomic Cell Types

Explore the latest dataset and taxonomy of human cell types: 10x Genomics analysis of 76,000 cells in the Primary Motor Cortex.

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New data from mouse and human patch-seq experiments, which lay a foundation for reconciling transcriptomic and morph-electric cell types.

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A database of biological features derived from single cells, from both human and mouse.

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Brain Observatory

A new approach to open data, featuring a survey of in vivo recordings from the mouse visual cortex.

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Mouse Brain Connectivity Atlas

A brain-wide map of neural projections, including cell class-specific data.

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Reference Atlases

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Mouse Brain Atlas

A unique multimodal atlas of the adult mouse brain, featuring anatomic and genomic data.

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Developing Mouse Brain Atlas

A detailed atlas of gene expression across 7 stages of development.

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Mouse Spinal Cord Atlas

A detailed atlas of gene expression across the adult and juvenile mouse spinal cord.

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Adult and Developing NHP Atlas

The NIH Blueprint Non-Human Primate Atlas characterizes the developing rhesus macaque brain.

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Human Brain Atlas

A unique multimodal atlas of the adult human brain, featuring anatomic and genomic data.

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Developing Human Brain

The BrainSpan project is a detailed atlas of gene expression across human development.

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Aging, Dementia and TBI

A dataset for exploring the neuropathology and genomic features of disease and aging.

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IvyGAP is a dataset for exploring the anatomic and genomic basis of glioblastoma.

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Highlights and insights into gene expression, viewed through Allen Brain Atlas datasets and publications

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Data and publications from the Allen Brain Observatory reveal new complexity of neuronal circuitry

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Connectivity Matrices

Multiscale datasets and publications uncover how the brain is wired

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Computational Modeling & Theory

Brain-wide, circuit-level and cell-level biophysical models, modeling tools and key publications

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Cell Taxonomies

View data-driven classifications and key publications analyzing cell types of the mammalian brain

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Access information about biological and technical resources created by the Allen Institute for Brain Science

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